McGowan, Silhavy, and Boos. (1974) 1974. “Involvement of a Tryptophan Residue in the Binding Site of Escherichia Coli Galactose-Binding Protein”. Biochemistry 13 (5): 993-9. doi:10.1021/bi00702a025.

Vertommen, Didier, Natividad Ruiz, Pauline Leverrier, Thomas Silhavy, and Jean-François Collet. (2009) 2009. “Characterization of the Role of the Escherichia Coli Periplasmic Chaperone SurA Using Differential Proteomics”. Proteomics 9 (9): 2432-43. doi:10.1002/pmic.200800794.

Kim, Seokhee, Juliana Malinverni, Piotr Sliz, Thomas Silhavy, Stephen Harrison, and Daniel Kahne. (2007) 2007. “Structure and Function of an Essential Component of the Outer Membrane Protein Assembly Machine”. Science 317 (5840): 961-4. doi:10.1126/science.1143993.

Emr, and Silhavy. (1983) 1983. “Importance of Secondary Structure in the Signal Sequence for Protein Secretion”. Proc Natl Acad Sci U S A 80 (15): 4599-603. doi:10.1073/pnas.80.15.4599.

Emr, and Silhavy. (1982) 1982. “Molecular Components of the Signal Sequence That Function in the Initiation of Protein Export”. J Cell Biol 95 (3): 689-96. doi:10.1083/jcb.95.3.689.

Lee, James, Holly Sutterlin, Joseph Wzorek, Michael Mandler, Christine Hagan, Marcin Grabowicz, David Tomasek, et al. (2018) 2018. “Substrate Binding to BamD Triggers a Conformational Change in BamA to Control Membrane Insertion”. Proc Natl Acad Sci U S A 115 (10): 2359-64. doi:10.1073/pnas.1711727115.

McCabe, Anne, Dante Ricci, Modupe Adetunji, and Thomas Silhavy. (2017) 2017. “Conformational Changes That Coordinate the Activity of BamA and BamD Allowing β-Barrel Assembly”. J Bacteriol 199 (20). doi:10.1128/JB.00373-17.

Slauch, and Silhavy. (1989) 1989. “Genetic Analysis of the Switch That Controls Porin Gene Expression in Escherichia Coli K-12”. J Mol Biol 210 (2): 281-92. doi:10.1016/0022-2836(89)90330-6.

Flower, Doebele, and Silhavy. (1994) 1994. “PrlA and PrlG Suppressors Reduce the Requirement for Signal Sequence Recognition”. J Bacteriol 176 (18): 5607-14. doi:10.1128/jb.176.18.5607-5614.1994.

Osborne, and Silhavy. (1993) 1993. “PrlA Suppressor Mutations Cluster in Regions Corresponding to Three Distinct Topological Domains”. EMBO J 12 (9): 3391-8.

Raivio, and Silhavy. (1997) 1997. “Transduction of Envelope Stress in Escherichia Coli by the Cpx Two-Component System”. J Bacteriol 179 (24): 7724-33. doi:10.1128/jb.179.24.7724-7733.1997.

Kenney, Bauer, and Silhavy. (1995) 1995. “Phosphorylation-Dependent Conformational Changes in OmpR, an Osmoregulatory DNA-Binding Protein of Escherichia Coli”. Proc Natl Acad Sci U S A 92 (19): 8866-70. doi:10.1073/pnas.92.19.8866.

Harris, and Silhavy. (1999) 1999. “Mapping an Interface of SecY (PrlA) and SecE (PrlG) by Using Synthetic Phenotypes and in Vivo Cross-Linking”. J Bacteriol 181 (11): 3438-44. doi:10.1128/JB.181.11.3438-3444.1999.

Cosma, Crotwell, Burrows, and Silhavy. (1998) 1998. “Folding-Based Suppression of Extracytoplasmic Toxicity Conferred by Processing-Defective LamB”. J Bacteriol 180 (12): 3120-30. doi:10.1128/JB.180.12.3120-3130.1998.

Dwyer, Robert, Dante Ricci, Lucy Colwell, Thomas Silhavy, and Ned Wingreen. (2013) 2013. “Predicting Functionally Informative Mutations in Escherichia Coli BamA Using Evolutionary Covariance Analysis”. Genetics 195 (2): 443-55. doi:10.1534/genetics.113.155861.

Ricci, Dante, Christine Hagan, Daniel Kahne, and Thomas Silhavy. (2012) 2012. “Activation of the Escherichia Coli β-Barrel Assembly Machine (Bam) Is Required for Essential Components to Interact Properly With Substrate”. Proc Natl Acad Sci U S A 109 (9): 3487-91. doi:10.1073/pnas.1201362109.

Rigel, Nathan, Jaclyn Schwalm, Dante Ricci, and Thomas Silhavy. (2012) 2012. “BamE Modulates the Escherichia Coli Beta-Barrel Assembly Machine Component BamA”. J Bacteriol 194 (5): 1002-8. doi:10.1128/JB.06426-11.

Soltes, Garner, Jaclyn Schwalm, Dante Ricci, and Thomas Silhavy. (2016) 2016. “The Activity of Escherichia Coli Chaperone SurA Is Regulated by Conformational Changes Involving a Parvulin Domain”. J Bacteriol 198 (6): 921-9. doi:10.1128/JB.00889-15.

Lee, James, Mingyu Xue, Joseph Wzorek, Tao Wu, Marcin Grabowicz, Luisa Gronenberg, Holly Sutterlin, et al. (2016) 2016. “Characterization of a Stalled Complex on the β-Barrel Assembly Machine”. Proc Natl Acad Sci U S A 113 (31): 8717-22. doi:10.1073/pnas.1604100113.